miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Ipomoea nil



ABOUT THIS RECORD

ID: MNEST008951
species: Ipomoea nil
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Ipomoea nil Ipomoea Ipomoeeae Convolvulaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCATCATCATCTTCATCTTCA

miRNA*
TGGAGGAGGACGGTGAAGATT

mismatches: 4
bulges: 0

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pre-miRNA
CAAAACCCTCATCATCATCATCTTCATCTTCATCTTCATCGTCGATTGCGTTTGGAGGCGGGGAGAGAAATTCAAGATCGATTCGGATGTAGAAGAAGTG
ATGATCAGATGTGGAGGAGGACGGTGAAGATTGGAGGAGT


dot-bracket secondary structure
......(((((((.(((((.(((((.(((.((((((((((.((..(((((((((((..(((.(((.....)))....))).)))))))))))..))...)
))))..))))).))).))))).))))).)))..))))...



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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